BIOSTEC 2013 - International Joint Conference on Biomedical Engineering Systems and Technologies

16:30 - 17:30 - Foyer Posters Session 1

BIODEVICES

17: Using Smartphone Bases Biodevices for Analyzing Physiological, Psychological and Behavioral User's Habits Federico Guede Fernández, Marc Pous Solà, Miguel Ángel García González, Lluís Capdevila Ortís, Juan Ramos Castro and Mireya Fernández Chimeno
50: BITtalino: A Biosignal Acquisition System based on the Arduino Ana Priscila Alves, Hugo Silva, André Lourenço and Ana Fred
63: Comparison of Energy Harvesting Techniques for Wearable Activity Monitoring Devices Ana Cimpian, Bastien Granier, Gearóid Ó Laighin and Maeve Duffy

BIOINFORMATICS

5: New Algorithm for Analysis of Off-target Effects in siRNA Screens Karol Kozak, Sandra Kaestner, Thomas Wild, Andreas Vonderheit, Benjamin Misselwitz, Ulrike Kutay and Gabor Csucs
12: Structure Prediction with FAMS for Proteins Screened Critically to Autoimmune Diseases based upon Bioinformatics Shigeharu Ishida, Hideaki Umeyama, Mitsuo Iwadate and Y-h. Taguchi
18: Evolution of Bacterial Genome under Changing Mutational Pressure - Computer Simulation Studies Paweł Błażej, Paweł Mackiewicz, Małgorzata Wańczyk and Stanisław Cebrat
26: Different Stimuli for Inference of Gene Regulatory Network in Rheumatoid Arthritis Peter Kupfer, Sebastian Vlaic, René Huber, Raimund W. Kinne and Reinhard Guthke
33: QUASI: A Pipeline for the Quality Assessment and Statistical Inference on Next Generation Sequencing Data from Pooled shRNA Library Screens Mark Onyango, Carsten Ade, Franz Cemič and Jürgen Hemberger
51: A Non-linear Finite Element Model for Assesment of Lumbar Spinal Injury Due to Dynamic Loading Alexander Tsouknidas, Savvas Savvakis , Nikolaos Tsirelis , Antonios Lontos and Nikolaos Michailidis

BIOSIGNALS

16: How to Compensate the Effect of using an Incomplete Wavelet Base for Reconstructing an Image? - Application in Psychovisual Experiment Sylvie Lelandais and Justin Plantier
30: Identification of Pronation-supination Patterns on Runners - An Aplication of Functional Principal Component Analysis E. Medina, H. de Rosario, J. Olaso, A. Ballester, J. Navarro and A. Page
54: EEG Motor Imagery Classification of Upper Limb Movements Maria Claudia F. Castro, João Pedro de O. P. Galhianne and Esther Luna Colombini
63: A New Approach for the Glottis Segmentation using Snakes G. Andrade Miranda, N. Saenz-Lechón, V. Osma-Ruiz and J. I. Godino-Llorente
81: Eigen Heartbeats for User Identification Marta S. Santos, Ana L. Fred, Hugo Silva and André Lourenço
91: GMM-based Classifiers for the Automatic Detection of Obstructive Sleep Apnea J.-A. Gómez-García, J.-L. Blanco-Murillo, J.-I. Godino-Llorente, L. A. Hernández Gómez and G. Castellanos-Domínguez
92: Human Activity Recognition for an Intelligent Knee Orthosis Diliana Rebelo, Christoph Amma, Hugo Gamboa and Tanja Schultz
97: Estimation of the Range of Motor Units Firing Rates from EMG Signals using a Fourier-based Power Spectrum Technique Armando Malanda, Ignacio Rodríguez, Luis Gila, Javier Navallas, Javier Rodríguez and Pierre A. Mathieu
104: Additional Pulmonary Blood Flow in the Cavopulmonary Anastomosis by Means of a Modified Blalock-Taussig Shunt - Is It a Beneficial Clinical Option? Giuseppe D'Avenio, Antonio Amodeo and Mauro Grigioni

HEALTHINF

17: Clustering of Gabor Atoms Describing Event-Related Potentials - Solution for ERP Detection Algorithm based on Matching Pursuit when ERP Waveform is Approximated by Two or More Gabor Atoms Tomas Rondik and Pavel Mautner
18: An Efficient Application of Gesture Recognition from a 2D Camera for Rehabilitation of Patients with Impaired Dexterity G. Ushaw, E. Ziogas, J. Eyre and G. Morgan
19: Leveraging an EMR to Improve Pediatric Asthma Care Compliance James A. Menke and Jeffery Hoffman
23: Automatic Wheeze Detection and Lung Function Evaluation - A Preliminary Study Ana Oliveira, Cátia Pinho, João Dinis, Daniela Oliveira and Alda Marques
51: Classifying Heart Sounds - Approaches to the PASCAL Challenge Elsa F. Gomes, Peter J. Bentley, Miguel Coimbra, Emanuel Pereira and Yiqi Deng
105: Investigation of the Sensorimotor Training using Wireless Sensor Networks - Analyzing Three Different Exerciser A. Thiers, L. Meffofok, K. Orlowski, K. Schrader, B. Titze, A. l'Orteye and T. Schrader
109: Improving Usability of EHR Software through Design for Progressive Enhancement - With a Case Study of Anfani Open Source EHR Software Timi Ogunjobi

08:15	Welcome Desk & Registration (08:15 - 09:00)
09:00	09:00 - 09:15 - Room MR.10 Opening Session
09:15	09:15 - 10:45 - Room MR.10 Panel Chair: Jordi Solé-Casals, University of Vic, Spain Title: Biomedicine: Revolution or Evolution? Panelists: Pedro Gómez Vilda Pedro Gómez Vilda, Universidad Politécnica de Madrid, Spain Christian Jutten, GIPSA-lab, France Adam Kampff, Champalimaud Foundation, Portugal Richard Reilly, Trinity College Dublin, Ireland Vladimir Devyatkov, Bauman Moscow State Technical University, Russian Federation Pietro Liò, University of Cambridge, United Kingdom
10:45	Coffee-Break (10:45 - 11:00)
11:00	11:00 - 13:00 - Room MR.05 Parallel Session 1 - BIODEVICES 7: A 0.18μm CMOS 2nd Order Sigma-Delta Modulator for Low-power Biosensor Applications Ryan Selby and Tom Chen 13: Contactless Electrical Bioimpedance System for Monitoring Ventilation - A Biodevice for Vehicle Environment Raúl Macías Macías, Miguel Ángel García González, Juan Ramos Castro, Ramon Bragós Bardia and Mireya Fernández Chimeno 23: Portable Custom Built Device for Thermal Sensitivity Assessment - An Auxiliary Tool to Characterize the Neuropathic Pain following Spinal Cord Injury Renato Varoto, Fábio Casagrande Hirono, Fernando Ometto Zorzenoni, Ricardo Yoshio Zanetti Kido, William Barcellos and Alberto Cliquet Jr. 61: A Novel and Low Cost Acoustic based Probe for Local Pulse Wave Velocity Estimation - Experimental Characterization and in-Vivo Feasibility H. C. Pereira, J. Maldonado, T. Pereira, M. Contente, V. Almeida, T. Pereira, J. B. Simões, J. Cardoso and C. Correia 11:00 - 13:00 - Room MR.06 Parallel Session 1 - BIOINFORMATICS 19: Assignment of Orthologous Genes by Utilization of Multiple Databases - The Orthology Package in R Steffen Priebe and Uwe Menzel 58: A Hybrid Local Search for Simplified Protein Structure Prediction Swakkhar Shatabda, M. A. Hakim Newton, Duc Nghia Pham and Abdul Sattar 84: RqPCRAnalysis: Analysis of Quantitative Real-time PCR Data Frédérique Hilliou and Trang tran 9: 2D-PAGE Texture Classification using Support Vector Machines and Genetic Algorithms - An Hybrid Approach for Texture Image Analysis Carlos Fernandez-Lozano, Jose A. Seoane, Pablo Mesejo, Youssef S. G. Nashed, Stefano Cagnoni and Julian Dorado 11:00 - 13:00 - Room MR.07 Parallel Session 1 - BIOSIGNALS 12: Athlete Identification using Acceleration and Electrocardiographic Measurements Recorded with a Wireless Body Sensor Peter Christ, Felix Werner, Ulrich Rückert and Jörg Mielebacher 23: Stable Measurement of Blood Flow while Running Using a Micro Blood Flowmeter Wataru Iwasaki, Masaki Nakamura, Takeshi Gotanda, Satoshi Takeuchi, Masutaka Furue, Eiji Higurashi and Renshi Sawada 40: Evaluation of KINECT and SHIMMER Sensors for Detection of Gait Parameters Katja Orlowski and Harald Loose 55: Model-based Detection and Analysis of Animal Behaviors using Signals Extracted by Automated Tracking Gennady Denisov, Tomoko Ohyama, Tihana Jovanic and Marta Zlatic 62: Algorithm for Testing Behavioural Phenotypes in a Zebrafish Model of Parkinson’s Disease Angela Pimentel, Hugo Gamboa, Sérgio Reis Cunha and Ana Dulce Correia 11:00 - 13:00 - Room MR.08 Parallel Session 1 - HEALTHINF 21: A New Method for Assessing the Exploratory Field of View (EFOV) Enkelejda Tafaj, Sebastian Hempel, Martin Heister, Kathrin Aehling, Janko Dietzsch, Frank Schaeffel, Wolfgang Rosenstiel and Ulrich Schiefer 39: Semantic Interoperability Solution for Multicentric Breast Cancer Trials at the Integrate EU Project Sergio Paraiso-Medina, David Perez-Rey, Raúl Alonso-Calvo, Brecht Claerhout, Kristof de Schepper, Philippe Hennebert, Jérôme Lhaut, Jasper Van Leeuwen and Anca Bucur 49: Collaborative Filtering for Identifying Prescription Omissions in an ICU Anima Singh and John Guttag 80: The PartoPen in Training and Clinical Use - Two Preliminary Studies in Kenya Heather Underwood, S. Revi Sterling and John K. Bennett 11:00 - 13:00 - Room MR.09 Parallel Session 1 - MHGInterf 2: Data Fusion in Multimodal Interface Alexander Alfimtsev 6: An EMG-based Assistive Orthosis for Upper Limb Rehabilitation Luis M. Vaca Benitez, Niels Will, Marc Tabie, Steffen Schmidt, Elsa Andrea Kirchner and Jan Albiez 4: New ‘Spider’ Convex Hull Algorithm - For an Unknown Polygon in Object Recognition Dmitriy Dubovitskiy and Jeff McBride
13:00	Lunch (13:00 - 14:30)
14:30	14:30 - 15:30 - Room MR.10 Keynote Lecture Voice as a vehicular tool to Organic and Neurological Disease Tracking: How far may we go? Pedro Gómez Vilda, Universidad Politécnica de Madrid, Spain
15:30	15:30 - 16:30 - Room MR.05 Parallel Session 2 - BIODEVICES 11: Influence of Pipette Geometry on the Displacement Profile of Isotropic Materials used for Vocal Fold Modeling Sandra Weiß, Scott L. Thomson, Alexander Sutor, Stefan J. Rupitsch and Reinhard Lerch 69: Carbon Electrode based Urea Sensor - Modification of Graphite and New Polymeric Carriers for Enzyme Immobilization Julija Razumiene, Ieva Sakinyte, Tatjana Kochane, Sandra Maciulyte, Antanas Straksys, Saulute Budriene and Jurgis Barkauskas 74: Cellular Factories - Emerging Technologies for Fabrication of Nanomedicines? V. Ramos, X. Turon and S. Borros 15:30 - 16:30 - Room MR.06 Parallel Session 2 - BIOINFORMATICS 17: Using a Random Forest Classifier to Find Nuclear Export Signals in Proteins of Arabidopsis thaliana Claudia Rubiano, Thomas Merkle and Tim W. Nattkemper 24: Visualization of BioinformaticsWorkflows for Ease of Understanding and Design Activities H. V. Byelas and M. A. Swertz 35: Alternative PPM Model for Quality Score Compression Mete Akgün and Mahmut Şamil Sağıroğlu 15:30 - 16:30 - Room MR.07 Parallel Session 2 - BIOSIGNALS 39: A New Physarum Learner for Network Structure Learning from Biomedical Data T. Schön, M. Stetter, A. M. Tomé and E. W. Lang 68: Collective Probabilistic Dynamical Modeling of Sleep Stage Transitions Sergio A. Alvarez and Carolina Ruiz 72: Snoring Analysis on Full Night Recordings based in the Energy and Entropy in PSG Basal Studies Tiago Marçal, José Basílio Simões, José Moutinho dos Santos, Agostinho Rosa and João Cardoso 15:30 - 16:30 - Room MR.09 Parallel Session 2 - MHGInterf 1: Application of the Device of Measurement of Bioelectric Activity of Muscles and Nerve Structures for Gesture Recognition - Application of Gesture Recognition on the Example of Action Game Levanov Alexey Alexendrovich 5: Microwave Radiation as Interface to the Brain Functional State V. S. Kublanov
16:30	16:30 - 17:30 - Foyer Posters Session 1 BIODEVICES 17: Using Smartphone Bases Biodevices for Analyzing Physiological, Psychological and Behavioral User's Habits Federico Guede Fernández, Marc Pous Solà, Miguel Ángel García González, Lluís Capdevila Ortís, Juan Ramos Castro and Mireya Fernández Chimeno 50: BITtalino: A Biosignal Acquisition System based on the Arduino Ana Priscila Alves, Hugo Silva, André Lourenço and Ana Fred 63: Comparison of Energy Harvesting Techniques for Wearable Activity Monitoring Devices Ana Cimpian, Bastien Granier, Gearóid Ó Laighin and Maeve Duffy BIOINFORMATICS 5: New Algorithm for Analysis of Off-target Effects in siRNA Screens Karol Kozak, Sandra Kaestner, Thomas Wild, Andreas Vonderheit, Benjamin Misselwitz, Ulrike Kutay and Gabor Csucs 12: Structure Prediction with FAMS for Proteins Screened Critically to Autoimmune Diseases based upon Bioinformatics Shigeharu Ishida, Hideaki Umeyama, Mitsuo Iwadate and Y-h. Taguchi 18: Evolution of Bacterial Genome under Changing Mutational Pressure - Computer Simulation Studies Paweł Błażej, Paweł Mackiewicz, Małgorzata Wańczyk and Stanisław Cebrat 26: Different Stimuli for Inference of Gene Regulatory Network in Rheumatoid Arthritis Peter Kupfer, Sebastian Vlaic, René Huber, Raimund W. Kinne and Reinhard Guthke 33: QUASI: A Pipeline for the Quality Assessment and Statistical Inference on Next Generation Sequencing Data from Pooled shRNA Library Screens Mark Onyango, Carsten Ade, Franz Cemič and Jürgen Hemberger 51: A Non-linear Finite Element Model for Assesment of Lumbar Spinal Injury Due to Dynamic Loading Alexander Tsouknidas, Savvas Savvakis , Nikolaos Tsirelis , Antonios Lontos and Nikolaos Michailidis BIOSIGNALS 16: How to Compensate the Effect of using an Incomplete Wavelet Base for Reconstructing an Image? - Application in Psychovisual Experiment Sylvie Lelandais and Justin Plantier 30: Identification of Pronation-supination Patterns on Runners - An Aplication of Functional Principal Component Analysis E. Medina, H. de Rosario, J. Olaso, A. Ballester, J. Navarro and A. Page 54: EEG Motor Imagery Classification of Upper Limb Movements Maria Claudia F. Castro, João Pedro de O. P. Galhianne and Esther Luna Colombini 63: A New Approach for the Glottis Segmentation using Snakes G. Andrade Miranda, N. Saenz-Lechón, V. Osma-Ruiz and J. I. Godino-Llorente 81: Eigen Heartbeats for User Identification Marta S. Santos, Ana L. Fred, Hugo Silva and André Lourenço 91: GMM-based Classifiers for the Automatic Detection of Obstructive Sleep Apnea J.-A. Gómez-García, J.-L. Blanco-Murillo, J.-I. Godino-Llorente, L. A. Hernández Gómez and G. Castellanos-Domínguez 92: Human Activity Recognition for an Intelligent Knee Orthosis Diliana Rebelo, Christoph Amma, Hugo Gamboa and Tanja Schultz 97: Estimation of the Range of Motor Units Firing Rates from EMG Signals using a Fourier-based Power Spectrum Technique Armando Malanda, Ignacio Rodríguez, Luis Gila, Javier Navallas, Javier Rodríguez and Pierre A. Mathieu 104: Additional Pulmonary Blood Flow in the Cavopulmonary Anastomosis by Means of a Modified Blalock-Taussig Shunt - Is It a Beneficial Clinical Option? Giuseppe D'Avenio, Antonio Amodeo and Mauro Grigioni HEALTHINF 17: Clustering of Gabor Atoms Describing Event-Related Potentials - Solution for ERP Detection Algorithm based on Matching Pursuit when ERP Waveform is Approximated by Two or More Gabor Atoms Tomas Rondik and Pavel Mautner 18: An Efficient Application of Gesture Recognition from a 2D Camera for Rehabilitation of Patients with Impaired Dexterity G. Ushaw, E. Ziogas, J. Eyre and G. Morgan 19: Leveraging an EMR to Improve Pediatric Asthma Care Compliance James A. Menke and Jeffery Hoffman 23: Automatic Wheeze Detection and Lung Function Evaluation - A Preliminary Study Ana Oliveira, Cátia Pinho, João Dinis, Daniela Oliveira and Alda Marques 51: Classifying Heart Sounds - Approaches to the PASCAL Challenge Elsa F. Gomes, Peter J. Bentley, Miguel Coimbra, Emanuel Pereira and Yiqi Deng 105: Investigation of the Sensorimotor Training using Wireless Sensor Networks - Analyzing Three Different Exerciser A. Thiers, L. Meffofok, K. Orlowski, K. Schrader, B. Titze, A. l'Orteye and T. Schrader 109: Improving Usability of EHR Software through Design for Progressive Enhancement - With a Case Study of Anfani Open Source EHR Software Timi Ogunjobi
17:00	Coffee-Break (17:00 - 17:15)
17:30	17:30 - 19:00 - Room MR.05 Parallel Session 3 - BIODEVICES 29: Bioimpedance Parameter as a Risk Factor to Assess Pine Decay - An Innovative Approach to the Diagnosis of Plant Diseases E. Borges, M. Sequeira, André F. V. Cortez, H. Catarina Pereira, T. Pereira, V. Almeida, T. M. Vasconcelos, I. M. Duarte, N. Nazaré, J. Cardoso and C. Correia 37: A Single Electrical Acupuncture Needle with Bipolar Electrodes for Biotissue Discrimination Giseok Kang, Jae-Cheon Kim, Sohee Kim and Jong-Hyun Lee 42: Drowsiness Detection by Electrooculogram Signal Analysis in Driving Simulator Conditions for Gold Standard Signal Generation N. Rodríguez-Ibáñez, P. Meca-Calderón, M. A. García-González, J. Ramos-Castro and M. Fernández-Chimeno 17:30 - 19:00 - Room MR.06 Parallel Session 3 - BIOINFORMATICS 11: Qualitative Analysis of Gene Regulatory Networks using Network Motifs Sohei Ito, Takuma Ichinose, Masaya Shimakawa, Naoko Izumi, Shigeki Hagihara and Naoki Yonezaki 28: The Distribution of Short Word Match Counts between Markovian Sequences Conrad J. Burden, Paul Leopardi and Sylvain Forêt 54: Learning Advanced TFBS Models from Chip-Seq Data - diChIPMunk: Effective Construction of Dinucleotide Positional Weight Matrices Ivan V. Kulakovskiy, Victor G. Levitsky, Dmitry G. Oschepkov, Ilya E. Vorontsov and Vsevolod J. Makeev 17:30 - 19:00 - Room MR.07 Parallel Session 3 - BIOSIGNALS 35: Single Frequency Approximation of Volume Conductor Models for Deep Brain Stimulation using Equivalent Circuits Christian Schmidt and Ursula van Rienen 46: Dynamic Data-based Modelling of Synaptic Plasticity: mGluR-dependent Long-term Depression Tim Tambuyzer, Tariq Ahmed, C. James Taylor, Daniel Berckmans, Detlef Balschun and Jean-Marie Aerts 13: Wavelet-based Semblance for P300 Single-trial Detection Carolina Saavedra and Laurent Bougrain 17:30 - 19:00 - Room MR.08 Parallel Session 3 - HEALTHINF 40: Inclusion of Data from the Domestic Domain in the Process of Clinical Decision Making using the Example of a Comprehensive Ambient Energy Expenditure Determination for COPD Patients Axel Helmer, Frerk Müller, Okko Lohmann, Andreas Thiel, Marco Eichelberg and Andreas Hein 60: StorageBIT - A Metadata-aware, Extensible, Semantic and Hierarchical Database for Biosignals Carlos Carreiras, Hugo Silva, André Lourenço and Ana Fred 61: Towards Adapting Scientific Workflow Systems to Healthcare Planning Bruno S. C. M. Vilar, Claudia Bauzer Medeiros and André Santanchè
19:00	Welcome Drink (19:00 - 19:30)